Sylamer: Fast assessment of microRNA binding and siRNA off-target effects from expression data

Stijn van Dongenet al., Nature Methods (2008).

Select a mRNA Expression data set

Upload a mRNA data custom file   2 columns file:Gene Symbol & Ranking param.

Select input parameters

Ranking parameter
Organism concerned
Sequences to scan
Word Size
Group Size
HighLight a miRNA
Use all words   if checked --> 4e6 words used, not only miRNAs seeds
Seed details