object.microarray
Class Microarray

java.lang.Object
  object.microarray.Microarray

All Implemented Interfaces:

java.io.Serializable

public class Microarray
extends java.lang.Object
implements java.io.Serializable

Description
Microarray Object
Infos : KLB - IPMC - 01/2004

See Also:

Serialized Form

Field Summary

private java.lang.String	arrayQuality
private java.lang.String	batchNumber batchNumber of the Microarray Object
private java.util.Date	date_attribution Attribution Date for this Microarray Object
private java.util.Date	date_expiration Expiration Date for this Microarray Object
private Hybridization	hybridization Hybridization Object for this Microarray Object
private boolean	is_active True if this Microarray Object is active
private boolean	is_experiment True if a hybridization is referenced for this Microarray Object
private boolean	is_normalized True if this Microarray Object is normalized via a biostats Object
private boolean	is_quantif True if a scan is referenced for this Microarray Object
private boolean	is_viewable True if a scan and a hybridization are referenced for this Microarray Object
private int	microarray_id ID of Microarray object
private int	microarray_order_id Microarray_project_type Object for this Microarray Object
private Microarray_project_type	microarray_project_type Microarray_project_type Object for this Microarray Object
private Microarray_type	microarray_type Microarray_type Object for this Microarray Object
private int	ordre_id ordre_id of this Microarray Object in the Spotting Object
private java.lang.String	short_slide_code Short slide code of the Microarray Object
private java.lang.String	slide_code Code of the Microarray Object
private int	spotting_id Spotting Object for this Microarray Object
private User	user User owner of this Microarray Object
private java.util.Vector	vectorScan Scan(s) Vector for this Microarray Object

Constructor Summary

Microarray()
Default constructor

Microarray(int microarray_id)
Constructs a Microarray object from Microarray ID

Microarray(java.lang.String slide_code)
Constructs a Microarray object from Microarray slide_code

Method Summary

java.lang.String	getArrayQuality() arrayQuality
java.lang.String	getBatchNumber() batchNumber of the Microarray Object
java.util.Date	getDate_attribution() Attribution Date for this Microarray Object
java.util.Date	getDate_expiration() Expiration Date for this Microarray Object
Hybridization	getHybridization() Hybridization Object for this Microarray Object
boolean	getIs_active() True if this Microarray Object is active
boolean	getIs_experiment() True if a hybridization is referenced for this Microarray Object
boolean	getIs_normalized() True if this Microarray Object is active
boolean	getIs_quantif() True if a scan is referenced for this Microarray Object
boolean	getIs_viewable() True if a scan and a hybridization are referenced for this Microarray Object
java.lang.String	getLabels()
java.util.Hashtable	getLinks()
int	getMicroarray_id() ID of Microarray object
int	getMicroarray_order_id() Microarray_project_type Object for this Microarray Object
Microarray_project_type	getMicroarray_project_type() Microarray_project_type Object for this Microarray Object
Microarray_type	getMicroarray_type() Microarray_type Object for this Microarray Object
int	getOrdre_id() ordre_id of this Microarray Object in the Spotting Object
java.lang.String	getShort_slide_code() Short slide code of the Microarray Object
java.lang.String	getSlide_code() Code of the Microarray Object
int	getSpotting_id() Spotting Object for this Microarray Object
User	getUser() User owner of this Microarray Object
java.util.Vector	getVectorScan() Scan(s) Vector for this Microarray Object
void	reloadScan() This function reload this.vectorScan from database.
void	removeScan(int i) This function remove scan from this.vectorScan at index i received.
boolean	save() This function save Microarray Object into database.
void	setArrayQuality(java.lang.String arrayQuality)
void	setBatchNumber(java.lang.String batchNumber)
void	setDate_attribution(java.util.Date date_attribution)
void	setDate_expiration(java.util.Date date_expiration)
void	setHybridization(Hybridization hybridization)
void	setIs_active(boolean is_active)
void	setIs_experiment(boolean is_experiment)
void	setIs_normalized(boolean is_normalized)
void	setIs_quantif(boolean is_quantif)
void	setIs_viewable(boolean is_viewable)
void	setMicroarray_id(int microarray_id)
void	setMicroarray_order_id(int microarray_order_id)
void	setMicroarray_project_type(Microarray_project_type microarray_project_type)
void	setMicroarray_type(Microarray_type microarray_type)
void	setOrdre_id(int ordre_id)
void	setShort_slide_code(java.lang.String short_slide_code)
void	setSlide_code(java.lang.String slide_code)
void	setSpotting_id(int spotting_id)
void	setUser(User user)
void	setVectorScan(java.util.Vector vectorScan)
void	switchState() This function switch is_active boolean state of this Microarray Object into database.
void	update() This function update Microarray Object into database.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

microarray_id

private int microarray_id

ID of Microarray object

microarray_type

private Microarray_type microarray_type

Microarray_type Object for this Microarray Object

microarray_project_type

private Microarray_project_type microarray_project_type

Microarray_project_type Object for this Microarray Object

microarray_order_id

private int microarray_order_id

Microarray_project_type Object for this Microarray Object

spotting_id

private int spotting_id

Spotting Object for this Microarray Object

ordre_id

private int ordre_id

ordre_id of this Microarray Object in the Spotting Object

slide_code

private java.lang.String slide_code

Code of the Microarray Object

short_slide_code

private java.lang.String short_slide_code

Short slide code of the Microarray Object

batchNumber

private java.lang.String batchNumber

batchNumber of the Microarray Object

date_expiration

private java.util.Date date_expiration

Expiration Date for this Microarray Object

date_attribution

private java.util.Date date_attribution

Attribution Date for this Microarray Object

user

private User user

User owner of this Microarray Object

vectorScan

private java.util.Vector vectorScan

Scan(s) Vector for this Microarray Object

hybridization

private Hybridization hybridization

Hybridization Object for this Microarray Object

is_quantif

private boolean is_quantif

True if a scan is referenced for this Microarray Object

is_experiment

private boolean is_experiment

True if a hybridization is referenced for this Microarray Object

is_viewable

private boolean is_viewable

True if a scan and a hybridization are referenced for this Microarray Object

is_active

private boolean is_active

True if this Microarray Object is active

is_normalized

private boolean is_normalized

True if this Microarray Object is normalized via a biostats Object

arrayQuality

private java.lang.String arrayQuality

Constructor Detail

Microarray

public Microarray()

Default constructor

Microarray

public Microarray(int microarray_id)

Constructs a Microarray object from Microarray ID

Parameters:

microarray_id - ID of existing Microarray

See Also:

Microarray_type, Microarray_project_type, User, Scan, Hybridization

Microarray

public Microarray(java.lang.String slide_code)

Constructs a Microarray object from Microarray slide_code

Parameters:

slide_code - Slide code of an existing Microarray Object

See Also:

Microarray_type, Microarray_project_type, User, Scan, Hybridization

Method Detail

getMicroarray_id

public int getMicroarray_id()

ID of Microarray object

setMicroarray_id

public void setMicroarray_id(int microarray_id)

getMicroarray_type

public Microarray_type getMicroarray_type()

Microarray_type Object for this Microarray Object

setMicroarray_type

public void setMicroarray_type(Microarray_type microarray_type)

getMicroarray_project_type

public Microarray_project_type getMicroarray_project_type()

Microarray_project_type Object for this Microarray Object

setMicroarray_project_type

public void setMicroarray_project_type(Microarray_project_type microarray_project_type)

getMicroarray_order_id

public int getMicroarray_order_id()

Microarray_project_type Object for this Microarray Object

setMicroarray_order_id

public void setMicroarray_order_id(int microarray_order_id)

getSpotting_id

public int getSpotting_id()

Spotting Object for this Microarray Object

setSpotting_id

public void setSpotting_id(int spotting_id)

getOrdre_id

public int getOrdre_id()

ordre_id of this Microarray Object in the Spotting Object

setOrdre_id

public void setOrdre_id(int ordre_id)

getSlide_code

public java.lang.String getSlide_code()

Code of the Microarray Object

setSlide_code

public void setSlide_code(java.lang.String slide_code)

getShort_slide_code

public java.lang.String getShort_slide_code()

Short slide code of the Microarray Object

setShort_slide_code

public void setShort_slide_code(java.lang.String short_slide_code)

getBatchNumber

public java.lang.String getBatchNumber()

batchNumber of the Microarray Object

setBatchNumber

public void setBatchNumber(java.lang.String batchNumber)

getDate_expiration

public java.util.Date getDate_expiration()

Expiration Date for this Microarray Object

setDate_expiration

public void setDate_expiration(java.util.Date date_expiration)

getDate_attribution

public java.util.Date getDate_attribution()

Attribution Date for this Microarray Object

setDate_attribution

public void setDate_attribution(java.util.Date date_attribution)

getUser

public User getUser()

User owner of this Microarray Object

setUser

public void setUser(User user)

getVectorScan

public java.util.Vector getVectorScan()

Scan(s) Vector for this Microarray Object

setVectorScan

public void setVectorScan(java.util.Vector vectorScan)

getHybridization

public Hybridization getHybridization()

Hybridization Object for this Microarray Object

setHybridization

public void setHybridization(Hybridization hybridization)

getIs_quantif

public boolean getIs_quantif()

True if a scan is referenced for this Microarray Object

setIs_quantif

public void setIs_quantif(boolean is_quantif)

getIs_experiment

public boolean getIs_experiment()

True if a hybridization is referenced for this Microarray Object

setIs_experiment

public void setIs_experiment(boolean is_experiment)

getIs_viewable

public boolean getIs_viewable()

True if a scan and a hybridization are referenced for this Microarray Object

setIs_viewable

public void setIs_viewable(boolean is_viewable)

getIs_active

public boolean getIs_active()

True if this Microarray Object is active

setIs_active

public void setIs_active(boolean is_active)

getIs_normalized

public boolean getIs_normalized()

True if this Microarray Object is active

setIs_normalized

public void setIs_normalized(boolean is_normalized)

getArrayQuality

public java.lang.String getArrayQuality()

arrayQuality

setArrayQuality

public void setArrayQuality(java.lang.String arrayQuality)

reloadScan

public void reloadScan()

This function reload this.vectorScan from database.

See Also:

Scan

removeScan

public void removeScan(int i)

This function remove scan from this.vectorScan at index i received.

Parameters:

i - index of scan in vectorScan to remove

update

public void update()

This function update Microarray Object into database.

See Also:

Microarray_type, Microarray_project_type, User

save

public boolean save()

This function save Microarray Object into database.

See Also:

Microarray_type, Microarray_project_type

switchState

public void switchState()

This function switch is_active boolean state of this Microarray Object into database.

getLabels

public java.lang.String getLabels()

getLinks

public java.util.Hashtable getLinks()