object.common
Class MapEST

java.lang.Object
  object.common.MapEST

All Implemented Interfaces:

java.io.Serializable

public class MapEST
extends java.lang.Object
implements java.io.Serializable

Description
Describe relations between Oligos object and Ests matchs
Infos : KLB - IPMC - 07/2007

See Also:

Serialized Form

Field Summary

private int	gene_id ID of the gene Object
private java.util.Hashtable	hashTissues hashTissues
private java.lang.String	map map for image

Constructor Summary

MapEST()
Default constructor

MapEST(int oligo_id, java.lang.String type)
Constructs a MapEST object

Method Summary

java.lang.String	createHeatMap(int organism_id)
java.lang.String	createHeatMap2(int organism_id)
int	getGene_id() Number of match
java.util.Hashtable	getHashTissues() hashTissues
java.lang.String	getMap() map for images
void	setGene_id(int gene_id)
void	setHashTissues(java.util.Hashtable hashTissues)
void	setMap(java.lang.String map)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

gene_id

private int gene_id

ID of the gene Object

hashTissues

private java.util.Hashtable hashTissues

hashTissues

map

private java.lang.String map

map for image

Constructor Detail

MapEST

public MapEST()

Default constructor

MapEST

public MapEST(int oligo_id,
              java.lang.String type)

Constructs a MapEST object

Parameters:

oligo_id - Id of a Sonde Object

type - Type of Object to Map to Est can be 'gene' or 'oligo'

Method Detail

getGene_id

public int getGene_id()

Number of match

setGene_id

public void setGene_id(int gene_id)

getHashTissues

public java.util.Hashtable getHashTissues()

hashTissues

setHashTissues

public void setHashTissues(java.util.Hashtable hashTissues)

getMap

public java.lang.String getMap()

map for images

setMap

public void setMap(java.lang.String map)

createHeatMap2

public java.lang.String createHeatMap2(int organism_id)
                                throws java.lang.Exception

Throws:

java.lang.Exception

createHeatMap

public java.lang.String createHeatMap(int organism_id)
                               throws java.lang.Exception

Throws:

java.lang.Exception