object.annotation
Class Oligo

java.lang.Object
  object.annotation.Sonde
      object.annotation.Oligo

All Implemented Interfaces:

java.io.Serializable

public class Oligo
extends Sonde
implements java.io.Serializable

Description
Oligo Object
Infos : KLB - IPMC - 08/2003

See Also:

Sonde, Serialized Form

Field Summary

private java.lang.String	enthalpy Enthalpy associated with this Oligo Object
private java.lang.String	entropy Entropy associated with this Oligo Object
private int	exon not use
private java.lang.String	free_energy Free Energy associated with this Oligo Object
private MapEST	mapEST MapEST Object of this Oligo Object
private double	score not use
private java.util.Vector	vectorCommande Vector of Commande Object in which this Oligo have been ordered

Fields inherited from class object.annotation.Sonde

hashGenoligo_rel, hashSpecificity, mamap, nb_est, organism_id, psl_coord, sequence, sonde_id, sonde_type_id, taille, tm, type, vectorGenoligo_rel, xhybrid_max

Constructor Summary

Oligo()
Default constructor

Oligo(int oligo_id)
Constructs an Oligo object from an Oligo ID

Method Summary

java.lang.String	getEnthalpy() Enthalpy associated with this Oligo Object
java.lang.String	getEntropy() Entropy associated with this Oligo Object
int	getExon() not use
java.lang.String	getFree_energy() Free Energy associated with this Oligo Object
MapEST	getMapEST() MapEST Object of this Oligo Object
double	getScore() not use
java.util.Vector	getVectorCommande() Vector of Commande Object in which this Oligo have been ordered
void	setEnthalpy(java.lang.String enthalpy)
void	setEntropy(java.lang.String entropy)
void	setExon(int exon)
void	setFree_energy(java.lang.String free_energy)
void	setMapEST(MapEST mapEST)
void	setScore(double score)
void	setVectorCommande(java.util.Vector vectorCommande)

Methods inherited from class object.annotation.Sonde

displaySpecificity, getHashGenoligo_rel, getHashSpecificity, getMamap, getNb_est, getNb_xhybrid_string, getOrganism_id, getPsl_coord, getSequence, getSequenceBR, getSonde_id, getSonde_type_id, getTaille, getTm, getVectorGenoligo_rel, getVectorInfos, getXhybrid_max, loadHashSpecificity, setHashGenoligo_rel, setHashSpecificity, setMamap, setNb_est, setOrganism_id, setPsl_coord, setSequence, setSonde_id, setSonde_type_id, setTaille, setTm, setVectorGenoligo_rel, setXhybrid_max

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

score

private double score

not use

exon

private int exon

not use

free_energy

private java.lang.String free_energy

Free Energy associated with this Oligo Object

enthalpy

private java.lang.String enthalpy

Enthalpy associated with this Oligo Object

entropy

private java.lang.String entropy

Entropy associated with this Oligo Object

vectorCommande

private java.util.Vector vectorCommande

Vector of Commande Object in which this Oligo have been ordered

mapEST

private MapEST mapEST

MapEST Object of this Oligo Object

Constructor Detail

Oligo

public Oligo()

Default constructor

Oligo

public Oligo(int oligo_id)

Constructs an Oligo object from an Oligo ID

Parameters:

oligo_id - ID of an existing Oligo Object

See Also:

Estoligo_rel, Commande

Method Detail

getScore

public double getScore()

not use

setScore

public void setScore(double score)

getExon

public int getExon()

not use

setExon

public void setExon(int exon)

getFree_energy

public java.lang.String getFree_energy()

Free Energy associated with this Oligo Object

setFree_energy

public void setFree_energy(java.lang.String free_energy)

getEnthalpy

public java.lang.String getEnthalpy()

Enthalpy associated with this Oligo Object

setEnthalpy

public void setEnthalpy(java.lang.String enthalpy)

getEntropy

public java.lang.String getEntropy()

Entropy associated with this Oligo Object

setEntropy

public void setEntropy(java.lang.String entropy)

getVectorCommande

public java.util.Vector getVectorCommande()

Vector of Commande Object in which this Oligo have been ordered

setVectorCommande

public void setVectorCommande(java.util.Vector vectorCommande)

getMapEST

public MapEST getMapEST()

MapEST Object of this Oligo Object

setMapEST

public void setMapEST(MapEST mapEST)