object.annotation
Class Exon

java.lang.Object
  object.annotation.Exon

All Implemented Interfaces:

java.io.Serializable

public class Exon
extends java.lang.Object
implements java.io.Serializable

Description
An Exon object belong to a Gene Object
Infos : KLB - IPMC - 12/2003

See Also:

Gene, Serialized Form

Field Summary

private int	end End of the exon on the Chromosome corresponding for the Gene object
private int	exon Order of the exon Object in the composition of the sequence of the Gene object
private int	gene_id ID of a Gene object owner of this Exon Object
private int	start Start of the exon on the Chromosome corresponding for the Gene object

Constructor Summary

Exon()
Default constructor

Exon(int gene_id, int exon, int start, int end)
Constructs an Exon object from several parameters

Method Summary

int	getEnd() End of the exon on the Chromosome corresponding for the Gene object
int	getExon() Order of the exon Object in the composition of the sequence of the Gene object
int	getGene_id() ID of a Gene object owner of this Exon Object
int	getStart() Start of the exon on the Chromosome corresponding for the Gene object
void	setEnd(int end)
void	setExon(int exon)
void	setGene_id(int gene_id)
void	setStart(int start)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

gene_id

private int gene_id

ID of a Gene object owner of this Exon Object

exon

private int exon

Order of the exon Object in the composition of the sequence of the Gene object

start

private int start

Start of the exon on the Chromosome corresponding for the Gene object

end

private int end

End of the exon on the Chromosome corresponding for the Gene object

Constructor Detail

Exon

public Exon()

Default constructor

Exon

public Exon(int gene_id,
            int exon,
            int start,
            int end)

Constructs an Exon object from several parameters

Parameters:

gene_id - ID of existing Gene Object : owner of this Exon Object

exon - order of the exon in the composition of the Gene Object

start - start on the chromosome

end - end on the chromosome

Method Detail

getGene_id

public int getGene_id()

ID of a Gene object owner of this Exon Object

setGene_id

public void setGene_id(int gene_id)

getExon

public int getExon()

Order of the exon Object in the composition of the sequence of the Gene object

setExon

public void setExon(int exon)

getStart

public int getStart()

Start of the exon on the Chromosome corresponding for the Gene object

setStart

public void setStart(int start)

getEnd

public int getEnd()

End of the exon on the Chromosome corresponding for the Gene object

setEnd

public void setEnd(int end)